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Publikace

  2007  2008  2009  2010  2011  2012  2013  2014  2015  2016  2017    2007-2017

Vyhledat publikaci:

Ústavní publikace v impaktovaných časopisech 2007-2017 (145)

  • Priyakshree Borthakur, Purna K Boruah, Najrul Hussain, Bhagyasmeeta Sharma, Manash R Das, Sara Matić, David Reha, Babak Minofar (2016) Experimental and Molecular Dynamics Simulation Study of Specific Ion Effect on the Graphene Oxide Surface and Investigation of the Influence on Reactive Extraction of Model Dye Molecule at Water-Organic Interface. In: Journal of Physical Chemistry C. Vol 120, pp. 14088-14100.
  • Isabella Derler, Isaac Jardin, Peter B Stathopulos, Martin Muik, Marc Fahrner, Vaselina Zayats, Saurabh Pandey, Michael Poteser, Barbara Lackner, Marketa Absolonova, Klaus Groschner, Rüdiger Ettrich, Mitsu Ikura, Christoph Romanin (2016) Cholesterol binding modulates Orai1 channel function. In: Science Signaling. Vol 412 (9), pp. ra10-ra10. AAAS.
  • Kopecky V. Jr; Ettrich R.; Pazderka T.; Hofbauerova K.; Reha D.; Baumruk V. (2016) Influence of ligand binding on structure and thermostability of human alpha1 -acid glycoprotein.. In: Journal of Molecular Recognition. Vol 29 (2), pp. 70-79.
  • Oksana Degtjarik, Jiři Brynda, Olga Ettrichova, Michal Kuty, Dhiraj Sinha, Ivana Kuta Smatanova, Jannette Carey, Rüdiger Ettrich, David Řeha (2016) Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA.. In: Journal of Physical Chemistry B. Vol 120, pp. 4867-4887.
  • Ali Reza Harifi-Mood, Roohollah Ghobadi, Sara Matić, Babak Minofar, David Řeha (2016) Solvation analysis of some Solvatochromic probes in binary mixtures of reline, ethaline, and glyceline with DMSO. In: Journal of Molecular Liquids. Vol 222, pp. 845-853.
  • Irene Frischauf*, Vasilina Zayats*, Michael Deix, Anna Hochreiter, Isaac Jardin Polo, Martin Muik, Barbara Lackner, Barbora Svobodova, Teresa Pammer, Monika Litvinukova, Amrutha Arumbakam Sridhar, Isabella Derler, Ivan Bogeski, Christoph Romanin, Rüdiger Ettrich**, Rainer Schindl** (2015) A calcium accumulating region, CAR, in the Orai1 channel enhances Ca2+- permeation and SOCE-induced gene transcription. In: Science Signaling. Vol 408 (8), pp. ra131-ra131. AAAS.
  • Vasilina Zayats, Thomas Stockner, Saurabh K Pandey, Katharina Wörz, Rüdiger Ettrich, Jost Ludwig (2015) A refined atomic scale model of the Saccharomyces cerevisiae K+-translocation protein Trk1p combined with experimental evidence confirms the role of selectivity filter glycines and other key residues. In: BBA-Biomembranes . Vol 5 (1848 ), pp. 1183-1195.
  • Liskova, Veronika; Bednar, David; Prudnikova, Tatyana; Rezacova, Pavlina; Koudelakova, Tana; Sebestova, Eva; Smatanova, Ivana Kuta; Brezovsky, Jan; Chaloupkova, Radka; Damborsky, Jiri (2015) Balancing the Stability-Activity Trade-Off by Fine-Tuning Dehalogenase Access Tunnels. In: CHEMCATCHEM. Vol 4 (7), pp. 648-659.
  • Natallia Kulik, Kristyna Slamova, Rudiger Ettrich, Vladimir Kren (2015) Computational study of β-N-acetylhexosaminidase from Talaromyces flavus, a glycosidase with high substrate flexibility. In: BMC Bioinformatics. Vol 1 (16), pp. 28-.
  • Iermak, I., Degtjarik, O., Steffler, F., Sieber, V. & Kuta Smatanova, I. (2015) Crystallization behaviour of glyceraldehyde dehydrogenase from Thermoplasma acidophilum.. In: Acta Cryst. F71. Vol 12 (71), pp. 1475-1480.
  • Keşan, G., Durchan, M., Tichý, J., Minofar, B., Kuznetsova, V., Fuciman, M., Šlouf, V., Parlak, C., Polívka, T. (2015) Different response of carbonyl carotenoids to solvent proticity helps to estimate structure of the unknown carotenoid from Chromera velia.. In: J. Phys. Chem. B. (119), pp. 12653-12663. ACS.
  • Eva Csefalvay, Mikalai Lapkouski, Alena Guzanova, Ladislav Csefalvay, Tatsiana Baikova, Igor Shevelev, Vitali Bialevich, Katsiaryna Shamayeva, Pavel Janscak, Ivana Kuta Smatanova, Santosh Panjikar, Jannette Carey, Marie Weiserova, Rüdiger Ettrich (2015) Functional coupling of duplex translocation to DNA cleavage in a type I restriction enzyme . In: PLoS ONE . Vol 6 (10), pp. e0128-.
  • S. Timr, J. Brabec, A. Bondar, T. Ryba, M. Zelezny, J. Lazar, P. Jungwirth (2015) Nonlinear optical properties of fluorescent dyes allow for accurate determination of their molecular orientations in phospholipid membranes. In: Journal of Physical Chemistry B. Vol 30 (119), pp. 9706-9716. ACS.
  • Adriana Rathner, Kousik Chandra, Petr Rathner, Michaela Horničáková, Judith Schlagnitweit, Jaroslava Kohoutová, Rüdiger Ettrich, Norbert Müller (2015) Resonance assignment of PsbP an extrinsic protein from Photosystem II of Spinacia oleracea . In: Biomolecular NMR Assignments . (DOI: 10.1007/s12104-015-9606-2)
  • Babak Minofar (2015) Self Assembly of Ionic Liquids at the Air/Water Interface. In: Journal of Self-Assembly and Molecular Electronics. (3), pp. 27-40.
  • Petr Rathner, Adriana Rathner, Michaela Hornicakova, Christian Wohlschlager, Kousik Chandra, Jaroslava Kohoutova, Rüdiger Ettrich, Reinhard Wimmer, Norbert Mueller (2015) Solution Structure of PsbQ from Photosystem II of Higher Plants. In: PROTEINS: Structure, Function, and Bioinformatics. (DOI: 10.1002/prot.24853)
  • Slamova, Kristyna; Krejzova, Jana; Marhol, Petr; Kalachova, Lubica; Kulik, Natallia; Pelantova, Helena; Cvacka, Josef; Kren, Vladimir (2015) Synthesis of Derivatized Chitooligomers using Transglycosidases Engineered from the Fungal GH20 beta-N-Acetylhexosaminidase. In: ADVANCED SYNTHESIS & CATALYSIS . Vol 8 (357), pp. 1941-1950.
  • Herben T., Sera B., Klimesova J. (2014) Clonal growth and sexual reproduction: tradeoffs and environmental constraints. In: OIKOS. Vol Doi 10.1111/oik.0169
  • Timr, Stepan; Bondar, Alexey; Cwiklik, Lukasz; Stefl, Martin; Hof, Martin; Vazdar, Mario; Lazar, Josef; Jungwirth, Pavel (2014) Accurate Determination of the Orientational Distribution of a Fluorescent Molecule in a Phospholipid Membrane. In: JOURNAL OF PHYSICAL CHEMISTRY B. Vol 118 (4), pp. 855-863.
  • Schutte B.J., Tomasek B.J., Davis A.S., Andersson L., Benoit D.L., Cirujeda A., Dekker J., Forcella F., Gonzalez-Andujar J.L., Graziani F., Murdoch A.J., Neve P., Rasmussen I.A., Sera B., Salonen J., Tei F., Toresen K.S. & Urbano J.M. (2014) An investigation to enhance understanding of the stimulation of weed seedling emergence by soil disturbance.. In: Weed Research. DOI: 10.1111/wre.12054.
  • Bumba, Ladislav; Sviridova, Ekaterina; Smatanova, Ivana Kuta; Rezacova, Pavlina; Veverka, Vaclav (2014) Backbone resonance assignments of the outer membrane lipoprotein FrpD from Neisseria meningitidis. In: BIOMOLECULAR NMR ASSIGNMENTS. Vol 8 (1), pp. 53-55.
  • S K Pandey, D Reha, V Zayats, M Melichercik, J Carey, R Ettrich (2014) Binding-competent states for L-arginine in E. coli arginine repressor apoprotein.. In: Journal of Molecular Modeling. Vol 20 (7), pp. 2330-.
  • Lahoda M, Mesters JR, Stsiapanava A, Chaloupkova R, Kuty M, Damborsky J, Kuta Smatanova I. (2014) Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31.. In: Acta Crystallogr D Biol Crystallogr. Vol 70(Pt 2):209-17 (doi: 10.1107/S1399004713026254)
  • Motyčka J, Mach P, Melicherčík M, Urban J. (2014) DFT and MD study of the divalent-cation-mediated interaction of ochratoxin A with DNA nucleosides.. In: J Mol Model.. Vol 20 (6), pp. 2274-. doi: 10.1007/s00894-014-2274-9.
  • Bondar, Alexey; Lazar, Josef (2014) Dissociated G alpha(GTP) and G beta gamma Protein Subunits Are the Major Activated Form of Heterotrimeric Gi/o Proteins. In: JOURNAL OF BIOLOGICAL CHEMISTRY. Vol 289 (3), pp. 1271-1281.
  • Jan Sykora, Jan Brezovsky, Tana Koudelakova, Maryna Lahoda, Andrea Fortova, Tatsiana Chernovets, Radka Chaloupkova, Veronika Stepankova, Zbynek Prokop, Ivana Kuta Smatanova, Martin Hof, Jiri Damborsky (2014) Dynamics and hydration explain failed functional transformation in dehalogenase design. In: NATURE CHEMICAL BIOLOGY. Vol 10 (6), pp. 428-430.
  • Mráz, I., Beran, P., Šerá, B., Gavril, B., Hnatiuc, E. (2014) Effect of low-temperature plasma treatment on the growth and reproduction rate of some plant pathogenic bacteria.. In: Journal of Plant Pathology. Vol 96 (1), pp. 63-67.
  • Kristýna Slámová, Natallia Kulik, Martin Fiala, Jana Krejzová-Hofmeisterová, Rüdiger Ettrich, Vladimír Křen (2014) Expression, characterization and homology modeling of a novel eukaryotic GH84 β-N-acetylglucosaminidase from Penicillium chrysogenum. In: rotein Expression and Purification. Vol 95, pp. 204-210.
  • Jana Krejzová, Kristýna Slámová, Petr Šimona, Lubica Kalachova, Natallia Kulik, Pavla Bojarová, Petr Marhol, Helena Pelantová, Josef Cvačka, Rüdiger Ettrich, Vladimír Křen (2014) Inhibition of GlcNAc-processing glycosidases by C-6-azido-NAG-thiazoline and its derivatives. In: Molecules. (19), pp. 3471-3488.
  • Sinha D., Shamayeva K., Ramasubramani V., Reha D., Bialevich V., Khabiri M., Guzanova A., Milbar N., Weiserova M., Csefalvay E., Carey J., Ettrich R. (2014) Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I.. In: Journal of Molecular Modeling. Vol 20 (7), pp. 2334-.
  • David Reha, Balasubramanian Harish, Dhiraj Sinha, Zdenek Kukacka, James McSally, Olga Ettrichova, Petr Novak, Jannette Carey, Rüdiger Ettrich (2014) Molecular dynamics comparison of E. coli WrbA apoprotein and holoprotein.. In: Journal of Molecular Modeling. Vol 20 (8), pp. 2400-.
  • Safarik, Ivo; Safarikova, Mirka (2014) One-step magnetic modification of non-magnetic solid materials. In: INTERNATIONAL JOURNAL OF MATERIALS RESEARCH. Vol 105 (1), pp. 104-107.
  • Habartova, Alena; Obisesan, Anthony; Minofar, Babak; Roeselova, Martina (2014) Partial hydration of n-alkyl halides at the water-vapor interface: a molecular simulation study with atmospheric implications. In: THEORETICAL CHEMISTRY ACCOUNTS. Vol 133 (3), pp. 1455-.
  • Melnikova, Lucia; Pospiskova, Kristyna; Mitroova, Zuzana, Kopcansky, Peter, Safarik, Ivo (2014) Peroxidase-like activity of magnetoferritin. In: MICROCHIMICA ACTA. Vol 181 (3-4), pp. 295-301.
  • Chaloupkova, Radka; Prudnikova, Tatyana; Rezacova, Pavlina; Prokop, Zbynek; Koudelakova, Tana; Daniel, Lukas; Brezovsky, Jan; Ikeda-Ohtsubo, Wakako; Sato, Yukari; Kuty, Michal; Nagata, Yuji; Smatanova, Ivana Kuta ; Damborsky, Jiri (2014) Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites. In: ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY. Vol 7 (70), pp. 1884-1897.
  • Iryna Kishko, Jannette Carey, David Reha, Jiri Brynda, Renee Winkler, Barasubramani Harish, Richard Guerra, Olga Ettrichova, Zdenek Kukacka, Olena Sheryemyetyeva, Petr Novak, Michal Kuty, Ivana Kuta Smatanova, Rudiger Ettrich, Mikalai Lapkouski (2013) 1.2 Å-resolution crystal structure of Escherichia coli WrbA holoprotein. In: Acta Crystallographica Section D: Biological Crystallography. Vol 9 (69), pp. 1748-1757. Wiley-Blackwell.
  • Ladislav Bumba, Ekaterina Sviridova, Ivana Kutá Smatanová, Pavlína Řezáčová, Václav Veverka (2013) Backbone resonance assignments of the outer membrane lipoprotein FrpD from Neisseria meningitidis. In: Biomolecular NMR Assignments. (DOI: 10.1007/s12104-012-9451-5) Springer Science.
  • Oksana Degtjarik, Radka Chaloupkova, Pavlina Rezacova, Michal Kuty, Jiri Damborsky and Ivana Kuta Smatanova (2013) Differences in crystallization of two LinB variants from Sphingobium japonicum UT26. In: ActA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS. Vol 69, pp. 284-287.
  • Milan Melicherčík, Alžbeta Holúbeková, Tibor Hianik, Ján Urban (2013) Effect of the aminoacid composition of model α-helical peptides on the physical properties of lipid bilayers and peptide conformation: a molecular dynamics simulation. In: Journal of Molecular Modeling. (DOI 10.1007/s00894-012-1550-9) Springer Science.
  • Veronika Stepankova, Morteza Khabiri, Jan Brezovsky, Antonin Pavelka, Jan Sykora, Mariana Amaro, Babak Minofar, Zbynek Prokop, Martin Hof, Rudiger Ettrich, Radka Chaloupkova, Jiri Damborsky (2013) Expansion of Access Tunnels and Active-Site Cavities Influence Activity of Haloalkane Dehalogenases in Organic Cosolvents. In: ChemBioChem. (14), pp. 890-897. Wiley-VCH.
  • Gita Prochazkovaa, Ivo Safarik, Tomas Branyik (2013) Harvesting microalgae with microwave synthesized magnetic microparticles. In: Bioresource Technology. Vol 130, pp. 472-477. Elsevier.
  • Morteza Khabiri, Babak Minofar, Jan Březovsky, Jiří Damborský, Rudiger Ettrich (2013) Interaction of Organic Solvents with Protein Structures at Protein-Solvent Interface. In: Journal of Molecular Modeling. (DOI:10.1007/s00894-012-1507-z) Springer Science.
  • Pospiskova, Kristyna; Safarik, Ivo (2013) Low-cost, easy-to-prepare magnetic chitosan microparticles for enzymes immobilization. In: CARBOHYDRATE POLYMERS. Vol 2 (96), pp. 545-548. ELSEVIER SCI LTD.
  • Pospiskova, Kristyna; Safarik, Ivo; Sebela, Marek; Kuncova, Gabriela (2013) Magnetic particles-based biosensor for biogenic amines using an optical oxygen sensor as a transducer. In: MICROCHIMICA ACTA. Vol 180, pp. 311-318. Springer Science.
  • Kristyna Pospiskova, Ivo Safarik (2013) Magnetically modified spent grain as a low-cost, biocompatible and smart carrier for enzyme immobilisation. In: Journal of the Science of Food and Agriculture. Vol 7 (93), pp. 1598-1602. Wiley-Society o fChemical Industry.
  • Cesar Augusto Lopez, Zofie Sovova, Floris J. van Eerden, Alex H. De Vries, and Siewert J. Marrink (2013) Martini force field parameters for glycolipids. In: J. Chem. Theory Comput.. Vol 9, pp. 1694-1708. American Chemical Society.
  • Safarik, I; Horska, K; Pospiskova, K; Maderova, Z; Safarikova, M (2013) Microwave Assisted Synthesis of Magnetically Responsive Composite Materials. In: IEEE TRANSACTIONS ON MAGNETICS. Vol 1 (49), pp. 213-218. IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC.
  • Šerá B., Gajdová I., Šerý M. & Špatenka P. (2013) New physicochemical treatment method of Poppy seeds for agriculture and food industries.. In: Plasma Science and Technology. Vol 15 (9), pp. 935-938. DOI: 10.1088/1009-0630/15/9/19.
  • Kristyna Pospiskova, Gita Prochazkova, Ivo Safarik (2013) One-step magnetic modification of yeasts cells by microwave synthesized iron oxides microparticles. In: Letters in Applied Microbiology. Vol 6 (55), pp. 456-461. Wiley - The Society for Applied Microbiology.
  • Šerá B., Válková D., Kociánová E., Šerý M., Feráková V. & Hodálová I. (2013) Population size of the monocarpic perennial Peucedanum arenarium Waldst et Kit. With regard to experimentally tested management strategies.. In: Pakistan Journal of Botany. Vol 45 (2), pp. 449-454.
  • Vasilina Zayats, Abdul Samad, Babak Minofar, Katherine Roelofs, Thomas Stockner, Rudiger Ettrich (2013) Regulation of the transient receptor potential channel TRPA1 by its N-terminal ankyrin repeat domain. In: Journal of Molecular Modeling. (DOI: 10.1007/s00894-012-1505-1) Springer Science.
  • Daniel Rozbeský, Žofie Sovová, Julien Marcoux, Petr Man, Rüdiger Ettrich, Carol V Robinson, Petr Novák (2013) Structural model of lymphocyte receptor NKR-P1C revealed bymass spectrometry and molecular modelling. In: Analytical Chemistry. Vol 85, pp. 1597-1604. American Chemical Society.
  • Alexander Dulebo, Rüdiger Ettrich, Rudolf Lucas, David Kaftan (2012) A Computational Study of the Oligosaccharide Binding Sites in the Lectin-Like Domain of Tumor Necrosis Factor and TIP Peptide. In: Current Pharmaceutical Design. Vol 27 (18), pp. 4236-4243. Bentham Science Publishers.
  • Iryna Kishko, Balasubramanian Harish, Vasilina Zayats, David Reha, Brian Tenner, Dhananjay Beri, Tobias Gustavsson, Rüdiger Ettrich, Jannette Carey (2012) Biphasic kinetic behavior of E. coli WrbA, an FMN-dependent NAD(P)H:quinone oxidoreductase.. In: PloS one. Vol 7, pp. e4390-.
  • Sera, Bozena (2012) Effects of Soil Substrate Contaminated by Knotweed Leaves on Seed Development. In: POLISH JOURNAL OF ENVIRONMENTAL STUDIES. Vol 3 (21), pp. 713-717. HARD publisher.
  • Śerá B., Gajdová I., Gavril B., Hnatiuc E., Šerý M., Špatenka P. (2012) Hemp (Cannabis sativa L.) seeds after plasma treatment.. In: IEEE. Vol eISBN 978-1-4673-165, pp. 1371-1374.
  • Śerá B., Gajdová I., Černák M., Gavril B., Hnatiuc E., Kováčik D., Kříha V., Sláma J., Šerý M., Špatenka P. (2012) How various plasma sources may affect seed germination and growth.. In: IEEE. Vol eISBN 978-1-4673-165, pp. 1365-1370.
  • Ivana Nemcovicova and Ivana Kuta Smatanova (2012) Chapter 11: Alternative Crystallization Technique: Cross Influence Procedure (CIP). In: Crystallization and Materials Science of Modern Artificial and Natural Crystals, Edited by: Elena Borisenko. (ISBN 978-953-307-608-9), pp. 249-276. InTech.
  • Azadeh Nikouee, Morteza Khabiri, Stephan Grissmer, Rüdiger Ettrich (2012) Charybdotoxin and margatoxin acting on the human voltage-gated potassium channel hKv1.3 and its H399N mutant: An experimental and computational comparison. In: Journal of Physical Chemistry B. Vol 116 (doi: 10.1021/jp2102463), pp. 5132-5140. American Chemical Society.
  • Safarik, Ivo; Horska, Katerina; Svobodova, Barbora; Safarikova, Mirka (2012) Magnetically modified spent coffee grounds for dyes removal. In: EUROPEAN FOOD RESEARCH AND TECHNOLOGY. Vol 2 (234), pp. 345-350.
  • Safarik, Ivo; Horska, Katerina; Pospiskova, Kristyna; Safarikova, Mirka (2012) One-step preparation of magnetically responsive materials from non-magnetic powders. In: POWDER TECHNOLOGY. (229), pp. 285-289. ELSEVIER SCIENCE SA.
  • Akbar K.F., Hale W.H.G., Śerá B., Ashraf I. (2012) Phytometric assessment of fertility of roadside soils and its relationship with major nutrients. In: POLISH JOURNAL OF ENVIRONMENTAL STUDIES. HARD publisher.
  • Safarik, Ivo; Pospiskova, Kristyna; Horska, Katerina; Safarikova, Mirka (2012) Potential of magnetically responsive (nano)biocomposites. In: SOFT MATTER. Vol 20 (8), pp. 5407-5413. ROYAL SOC CHEMISTRY.
  • Božena Šerá (2012) Which stem parts of Slender speedwell (Veronica filiformis) are the most successful in plant regeneration?. In: Biologia. Vol 67(1), pp. 110-115.
  • Vrchotová N., Šerá B. & Krejčová J. (2011) Allelopathic activity of extracts from Impatiens species. In: Plant Soil and Environment. Vol 57(2), pp. 57-60.
  • M Horničáková, J Kohoutová, J Schlagnitweit, C Wohlschlager, R Ettrich, R Fiala, W Schoefberger, N Müller (2011) Backbone assignment and secondary structure of the PsbQ protein from Photosystem II. In: Biomolecular NMR Assignments. Vol 2 (5), pp. 169-175.
  • Pecova, M ; Zajoncova, L ; Polakova, K ; Cuda, J ; Safarikova, M ; Sebela, M ; Safarik, I (2011) Biologically Active Compounds Immobilized on Magnetic Carriers and Their Utilization in Biochemistry and Biotechnology. In: CHEMICKE LISTY. Vol 7 (105), pp. 524-530.
  • Natallia Kulik, Kristyna Slámova (2011) Computational Modelling of Catalytic Properties and Modified Substrates of Fungal beta-N-Acetylhexosaminidases. In: Mini-Reviews in Organic Chemistry. ( 8), pp. 270-280. Bentham Science Publishers Ltd.
  • Uzun, L ; Saglam, N ; Safarikova, M ; Safarik, I ; Denizli, A (2011) Copper Biosorption on Magnetically Modified Yeast Cells Under Magnetic Field . In: SEPARATION SCIENCE AND TECHNOLOGY . Vol 6 (46), pp. 1045-1051 .
  • Lahoda, M ; Chaloupkova, R ; Stsiapanava, A ; Damborsky, J ; Smatanova, IK (2011) Crystallization and crystallographic analysis of the Rhodococcus rhodochrous NCIMB 13064 DhaA mutant DhaA31 and its complex with 1,2,3-trichloropropane . In: ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS . (67), pp. 397-400.
  • Stsiapanava, A ; Chaloupkova, R ; Fortova, A ; Brynda, J ; Weiss, MS ; Damborsky, J ; Smatanova, IK (2011) Crystallization and preliminary X-ray diffraction analysis of the wild-type haloalkane dehalogenase DhaA and its variant DhaA13 complexed with different ligands . In: ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS. (67), pp. 253-257 .
  • Prudnikova T, Chaloupkova R, Sato Y , Nagata Y , Degtjarik O, Kuty M, Rezacova P, Damborsky J, Smatanova IK (2011) Development of a Crystallization Protocol for the DbeA1 Variant of Novel Haloalkane Dehalogenase from Bradyrhizobium elkani USDA94 . In: CRYSTAL GROWTH & DESIGN. Vol 2 (11), pp. 516-519.
  • Ryslava, Helena, Kalendova, Alzbeta, Doubnerova, Veronika, Skocdopol, Premysl, Hodkova, Anna, Kukacka, Zdenek, Slamova, Kristyna, Bojarova, Pavla, Pompach, Petr, Kumar, Vinay, Kulik, Natallia, Ettrich, Rudiger, Kren, Vladimir, Bezouška, Karel (2011) Enzymatic characterization and molecular modeling of an evolutionarily interesting fungal beta-N-acetylhexosaminidase. In: FEBS journal. (278), pp. 2469-2484.
  • Ondrej Kaplan, Karel Bezouska, Ondrej Plihal, Rudiger Ettrich, Natallia Kulik, Ondrej Vanek, Daniel Kavan, Oldrich Benada, Anna Malandra, Ondrej Sveda, Alicja B Vesela, Anna Rinagelova, Kristyna Slamova, Maria Cantarella, Jurgen Felsberg, Jarmila Duskova, Jan Dohnalek, Vladimir Kren, Ludmila Martinkova (2011) Heterologous expression, purification and characterization of nitrilase from Aspergillus niger K10. In: BMC Biotechnology . (11), pp. 2-.
  • R Strawn, T Stockner, M Melichercik, L Jin, W - F Xue, J Carey, R Ettrich (2011) CHAPTER FIVE: Synergy of molecular dynamics and isothermal titration calorimetry in studies of allostery.. In: Methods in Enzymology, Biothermodynamics, Part D Volume 492 Edited by:Michael L. Johnson, Jo M. Holt , Gary K. Ackers. . Vol ISBN: 978-0-12-38600, pp. 151-189. Academic Press - Elsevier Publishing Company, .
  • P Bojarova, K Slamova, K Krenek, R Gazak, N Kulik, R Ettrich, H Pelantova, M Kuzma, S Riva, D Adamek, K Bezouska, V Kren (2011) Charged hexosaminides as new substrates for β-N-acetyl-hexosaminidase catalyzed synthesis of immunomodulatory disaccharides. In: Advanced Synthesis & Catalysis. (353), pp. 2409-2420.
  • Morteza Khabiri, Azadeeh Nikouee, Lukasz Cwiklik, Stephan Grissmer, Rudiger Ettrich (2011) Charybdotoxin unbinding from the mKv1.3 potassium channel: A combined computational and experimental study. In: Journal of Physical Chemistry B. Vol 115, pp. 11490-11500.
  • Jana Jirásková-Vaníčková, Rudiger Ettrich, Barbora Vorlová, Hillary Hoffman, Martin Lepšík, Petr Jansa, Jan Konvalinka (2011) Inhibition of Human Serine Racemase, an Emerging Target for Medicinal Chemistry . In: Current Drug Targets. Vol 7 (12), pp. 1037-1055.
  • Liu, Y ; Minofar, B ; Desyaterik, Y ; Dames, E ; Zhu, Z ; Cain, JP ; Hopkins, RJ ; Gilles, MK ; Wang, H ; Jungwirth, P ; Laskin, A (2011) Internal structure, hygroscopic and reactive properties of mixed sodium methanesulfonate-sodium chloride particles. In: PHYSICAL CHEMISTRY CHEMICAL PHYSICS . Vol 25 (13), pp. 11846-11857.
  • Safarik,I., Horska,K., Safarikova,M (2011) Magnetically modified spent grain for dye removal.. In: J. Cereal Sci.. Vol 53, pp. 78-80.
  • Safarik,I., Horska,K., Safarikova,M. (2011) Magnetically responsive biocomposites for inorganic and organic xenobiotics removal.. In: In: Microbial Biosorption of Metals (Kotrba,P., Mackova,M., Macek, T., Editors)., pp. 301-320. Springer.
  • Žofie Sovová, Vladimír Kopecký Jr, Tomáš Pazderka, Kateřina Hofbauerová, Daniel Rozbeský, Ondřej Vaněk, Karel Bezouška, Rüdiger Ettrich (2011) Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity Journal of Molecular Modeling online 2010 Sep 14: DOI: 10.1007/s00894-010-0837-y (2011) Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity. In: Journal of Molecular Modeling. Vol 6 (17), pp. 1353-1370.
  • Abdul Samad, Lucie Sura, Jan Benedikt, Rudiger Ettrich, Babak Minofar, Jan Teisinger, Viktorie Vlachova (2011) The C-terminal basic residues contribute to the chemical and voltage-dependent activation of TRPA1 . In: Biochemical Journal. Vol 1 (433), pp. 197-204.
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