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Seminar on restriction-modification systems and DNA repair, Nove Hrady, 26.4.2012, 11 a.m.
11.00 Opening (Ettrich, Weiserova, Krejci)
11.10 Rudiger Ettrich (INSB, Nove Hrady): Structural aspects of translocation, binding and DNA cleavage in type I RMs, introduction into the field and state of the art
11. 45 Jozef Lazar (INSB, Nove Hrady): two-photon polarization microscopy in cell biology
12. 05 Mikalai Lapkouski (INSB, Nove Hrady): Organization of RAG1/RAG2 Signal End Cleavage complex
12.20 discussion Microsoft 70-410 exam
12.30 lunch (Restaurace Teresa)
14.00 Lumir Krejci (MU, Brno): DNA repair and genomic stability
14.05 Victoria Marini (MU, Brno): Methods part 1 (DNA substrates; EMSA; helicase, branch migration and nuclease assays, SPR technique)
14.20 Marek Sebesta (MU, Brno): Methods part 2 (ATPase, strand exchage, D-loop and reconstitution assays, protein modification by sumoylation)
14.35 Jan Vrbsky (MU, Brno): Syntetic lethal approach and generation of iPS cells.
14.50 discussion
15.00 Marie Weiserova (IMB, Prague): Analysis of the restriction-modification function of Type I enzymes in vivo.
15.15 Alena Guzanova (IMB, Prague): Biochemical analysis of the EcoR124I enzyme.
15:30 discussion
15.40 coffee break
16.00 Tatjana Baikova (INSB, Nove Hrady): Crystalization of EcoAi and EcoR124I mutants
16.10 Vitali Bialevich (INSB, Nove Hrady): Biochemical activity measurements of RM-I systems in vitro
16.20 David Reha (INSB, Nove Hrady): QM/MM approaches including polarization to improve ligand-binding
16.30 Dhiraj Sinha (INSB, Nove Hrady): Modeling helicase-endonuclease interactions
16.40 free discussion, touristic walk-around
19.00 Get-together and poster session